Équipe-projet Mamba (ex-Bang) : publications

  • Articles et chapitres de livres

      Années 2013 et 2014

      A compléter. Voir les rapports d'activité de l'équipe-projet Mamba pour 2013 et pour 2014

      Année 2012

      Billy, F., Clairambault, J., Delaunay, F., Feillet, C., Robert, N.
      Age-structured cell population model to study the influence of growth factors on cell cycle dynamics.
      Mathematical Biosciences and Engineering, accepted. Preprint available

      Billy, F., Clairambault, J. Designing proliferating cell population models with functional targets for control by anti-cancer drugs. DCDS-B, accepted, 2012. Preprint available

      Thomas, F., Fisher, D., Fort, P., Marie, J.-P., Daoust, S., Roche, B., Grunau, C., Cosseau, C., Mitta, G., Baghdiguian, S., Rousset, F., Lassus, P., Assenat, E., Grégoire, D., Missé, D., Lorz, A., Billy, F., Vainchenker, W., Delhommeau, F., Koscielny, S., Itzykson, R., Tang, RP, Fava, F., Ballesta, A., Lepoutre, T., Krasinska, L., Dulic, V., Raynaud, P., Blache, P., Quittau-Prevostel, C., Vignal, E., Trauchessec, H., Perthame, B., Clairambault, J., Volpert, V., Solary, E., Hibner, U., Hochberg, M.E.
      Applying ecological and evolutionary theory to cancer: a long and winding road. Evolutionary Applications, pub. on line 16 Nov. 2012, DOI: 10.1111/eva.1202.

      Lorz, A., Lorenzi, T., Hochberg, M.E., Clairambault, J., Perthame, B.
      Populational adaptive evolution, chemotherapeutic resistance and multiple anti-cancer therapies.
      Mathematical Modelling and Numerical Analysis, accepted, 2012. Preprint available

      .

      Ballesta, A., Clairambault, J., Dulong, S., Lévi, F.
      A systems biomedicine approach for chronotherapeutics optimization: focus on the anticancer drug irinotecan.
      In: ''New Challenges for Cancer Systems Biomedicine'', SIMAI Lecture Notes, Springer, New York, in press, 2012. Preprint available.

      Billy, F., Clairambault, J., Fercoq, O.
      Optimisation of cancer drug treatments using cell population dynamics.
      In "Mathematical Models and Methods in Biomedicine'', A. Friedman, E. Kashdan, U. Ledzewicz and H. Schättler eds., Part 4, pp. 265-309, Springer, New-York, 2013. Preprint available.

      Billy, F., Clairambault, J., Fercoq, O., Gaubert, S., Lepoutre, T., Ouillon, T., Saito, S.
      Synchronisation and control of proliferation in cycling cell population models with age structure.
      Mathematics and Computers in Simulation, in press, 2012, http://dx.doi.org/10.1016/j.matcom.2012.03.005.

      Özbay, H., Bonnet, C., Benjelloun, H., Clairambault, J.
      Stability analysis of cell dynamics in leukemia.
      Mathematical Modelling of Natural Phenomena, 7(1):203-234, 2012. Preprint available.

      Clairambault, J.
      Can theorems help treat cancer? J. Math. Biol., in press, 2012. doi:10.1007/s00285-012-0518-9.
      Preprint available.

      Ramis-Conde, I, and Dirk Drasdo
      From genotypes to phenotypes: classification of the tumor profiles for different variants of the cadherin adhesion pathway.
      Phys. Biol. 2012 June 8; 9(3):36008-36019

      Min Tang, Nicolas Vauchelet, Ibrahim Cheddadi, Irene Vignon-Clementel, Dirk Drasdo, Benoit Perthame
      Composite waves for a cell population system modelling tumor growth and invasion. Chinese Annales of Math. (Accepted)

      Dirk Drasdo and Stefan Hoehme
      Predicting the growth pattern of cell populations: pushing, pulling and the effect of an granular and cellular embedding medium.
      New Journal of Physics 14, 055025 (37pp)

      Holzhütter Hermann-Georg, Dirk Drasdo, Tobias Preusser, Joerg Lippert and Adriano Henney
      The Virtual Liver: A Multidisciplinary, Multi-level Challenge for Systems Biology.
      Wiley Interdisciplinary Reviews - Systems Biology and Medicin, Volume 4, Issue 3, Pages 221-235

      Année 2011

      Audusse, E., Bristeau, M.O., Pelanti, M., Sainte-Marie, J.
      Approximation of the hydrostatic Navier-Stokes system for density stratified flows by a multilayer model.
      Kinetic interpretation and numerical validation.
      J. Comput. Phys., 230(9), 3453-3478, 2011

      Audusse, E., Bristeau, M.O., Perthame, B., Sainte-Marie, J.
      A multilayer Saint-Venant system with mass exchanges for Shallow Water flows. Derivation and Numerical Validation.
      M2AN Math. Model. Numer. Anal., Vol. 45(1), 169-200, 2011.

      Bristeau, M.O., Goutal, N., Sainte-Marie, J.
      Numerical simulations of a non-hydrostatic shallow water model.
      Computers & Fluids, Vol. 47, No. 1, 51-64, 2011

      Pelanti, M., Bouchut, F., Mangeney, A.
      A Riemann Solver for Single-Phase and Two-Phase Shallow Flow Models based on Relaxation. Relations with Roe and VFRoe Solvers.
      J. Comput. Phys., 230(3):515-550, 2011.

      Sainte-Marie, J.
      Vertically Averaged Models for the Free Surface Euler System. Derivation and Kinetic Interpretation.
      Mathematical Models and Methods in Applied Sciences, Vol. 21, No. 3, 459--490, 2011.

      Drasdo, D., Hoehme, S., Hengstler, J.
      A quantiative mathematical modeling approach to liver regeneration.
      In Liver Regeneration. Editor: Dieter Häussinger. De Gruyter Berlin/Boston.

      Hoehme, S., Hammad, S., Othman, A., vonRecklinghausen, I., Boettger, J., Gebhardt, R., Dirsch, O., Hengstler, J.G., Drasdo, D.
      Modeling liver regeneration in a virtual lobe.
      In proceedings of: Living Imaging 2011 Workshop (LIVIM); December 1 - 2, 2011; IRCAD, Strasbourg, France

      Année 2010

      Berestycki, H., Nadin, G., Perthame, B. Ryzhik, L.
      The non-local Fisher-KPP equation: traveling waves and steady states.
      Nonlinearity, to appear, 2010.

      Clairambault, J., Gaubert, S., Lepoutre, T.
      Circadian rhythm and cell population growth.
      Mathematical and Computer Modelling, to appear, 2010.

      Doumic, M., Gabriel, P.
      Eigenelements of a general aggregation-fragmentation mode.
      M3AS, to appear, 2010.

      Doumic, M., Goudon, T., Lepoutre, T.
      Scaling limit of a discrete prion dynamics model.
      Communications in Mathematical Sciences, to appear, 2010.

      Doumic, M., Kim, P., Perthame, B.
      Stability analysis of a simplified yet complete model for chronic myelegeneous leukemia.
      Bull. Math. Biol., to appear, 2010.

      Gabriel, P.
      Shape of the polymerization rate in the prion equation.
      Mathematical and Computer Modelling, to appear, 2010.

      Goutal, N., Sainte-Marie, J.
      A kinetic interpretation of the section-averaged Saint-Venant system for natural river hydraulics.
      International Journal for Numerical Methods in Fluids, published on line, DOI: 10.1002/fld.2401, 2010.

      Lévi, F., Okyar, A., Dulong, S., Innominato, P.F., Clairambault, J.
      Circadian Timing in Cancer Treatments.
      Annual Review of Pharmacology and Toxicology, vol. 50, pp. 377-421, 2010.

      Marrocco, A., Henry, H., Holland, I., Plapp, M., Seror, S., Perthame, B.
      Models of self-organizing bacterial communities and comparisons with experimental observations.
      Math. Model. Nat. Phenom., to appear, 2010.

      Radszuweit, M., Block, M., Hengstler, J., Schoell, E., Drasdo, D.
      Comparing the growth kinetics of cell populations in two and three dimensions.
      Phys. Rev. E, 2010, vol. 79, no. 051907.

      Steimer, J.-L., Dahl, S. G., De Alwis, D., Gundert-Remy, U., Karlsson, M., Martinkova, J., Aarons, L., Ahr, H.-J., Clairambault, J., Freyer, G., Friberg, L., Ludwig, W.-D., De Nicolao, G., Rocchetti, M., Troconiz, I. F.
      Modelling the genesis and treatment of cancer: the potential role of physiologically-based pharmacodynamics.
      European Journal of Cancer, 2010, 46(1):21-32.

      Année 2009

      Bendahmane, M,. Lepoutre, T., Marrocco, A., Perthame, B.
      Conservative cross diffusions and pattern formation through relaxation.
      Journal de Mathématiques Pures et Appliquées, December 2009, vol. 92, no. 6, pp. 651-667.
      http://www.sciencedirect.com/science/article/B6VMD-4WD1C3K-1/2ca28b3816376790bee1a483dff3b38be.

      Byrne, H., Drasdo, D.
      Individual-based and continuum models of growing cell populations: a comparison.
      J. Math. Biol., 2009, vol. 58, no. 4-5, pp. 657-687.

      Calvez, V., Lenuzza, N., Doumic, M., Deslys, J.-P. , Mouthon, F., Perthame, B.
      Prion dynamics with size dependency - strain phenomena.
      J. Biological Dynamics, 2009, vol. 4, no. 1, pp. 28-42.

      Calvez, V., Lenuzza, N., Oelz, D., Deslys, J.-P., Laurent, P., Mouthon, F., Perthame, B.
      Size distribution dependence of prion aggregates infectivity.
      Math. Biosciences, 2009, vol. 217, pp. 88-99.

      CLAIRAMBAULT, J.
      Modelling physiological and pharmacological control on cell proliferation to optimise cancer treatments.
      Mathematical Modelling of Natural Phenomena, 4(3):12-67, 2009. doi: 10.1051/mmnp/20094302.

      CLAIRAMBAULT, J., GAUBERT, S., AND LEPOUTRE, T.
      Comparison of Perron and Floquet eigenvalues in age structured cell division models.
      Mathematical Modelling of Natural Phenomena, 4(3):183-209, 2009. doi: 10.1051/mmnp/20094308.

      DECOENE, A., AND GERBEAU, J.-F.
      Sigma transformation and ALE formulation for three-dimensional free surface flows.
      Internat. J. Numer. Methods Fluids, 59(4):357-386, 2009.

      Dalibard, A.-L., Perthame, B.
      Existence of solutions of the hyperbolic Keller-Segel model.
      Trans. AMS, 2009, vol. 361, no. 5, pp. 2319-2335.

      Doumic, M.
      Boundary Value Problem for an Oblique Paraxial Model of Light Propagation.
      MAA, March 2009, vol. 16, no. 1, pp. 119-138.

      Doumic, M., Duboc, F., Golse, F., Sentis, R.
      Simulation of laser beam propagation with a paraxial model in a tilted frame.
      Journal of Computational Physics, February 2009, vol. 228, no. 3, pp. 861-880.

      Doumic, M., Perthame, B., Zubelli, J.
      Numerical Solution of an Inverse Problem in Size-Structured Population Dynamics.
      Inverse Problems, April 2009, vol. 25, no. 4.

      Höhme, S., Drasdo, D.
      Biomechanical versus nutrient control: what determines the growth dynamics of mammalian cell population?
      Mathematical Population Studies, accepted, 2009.

      Krinner, A., Zscharnack, M., Bader, A., Drasdo, D., Galle, J.
      The impact of the oxygen environment on mesenchyma stem cell expansion and chondrogenic differentiation.
      Cell Proliferation, 2009, vol.Ê42, pp. 471-484.

      Laurençot, P., Perthame, B..
      Exponential decay for the growth-fragmentation/cell-division equation.
      Comm. Math. Sci., 2009, vol. 7, no. 2, p. 503-510.

      Ramis-Conde, I., Chaplain, M., Anderson, A., Drasdo, D.
      Multi-scale modelling of cell intravasation: role of cadherins in metastasis.
      Phys. Biol., 2009, vol. 6, no. 1, p. 16008-16020.

      Souganidis, P., B. Perthame, B.
      Asymmetric potentials and motor effect: an homogeneisation approach.
      Ann. IHP, Anal. Non Linéaire, 2009, vol. AN 26, no. 6, pp. 2055-2071.

      Souganidis, P., Perthame, B.
      Asymmetric potentials and motor effects: a large deviation approach.
      ARMA, 2009, vol. 193, no. 1, pp. 153-163.

      Année 2008

      ADIMY, M., BERNARD, S., CLAIRAMBAULT, J., CRAUSTE, F., GÉNIEYS, S., AND PUJO-MENJOUET, L.
      Modélisation de la dynamique de l'hématopoïèse normale et pathologique.
      Hématologie, 14(5):339-350, 2008.

      AUDUSSE, E., BRISTEAU, M.-O., AND DECOENE, A.
      Numerical simulations of 3d free surface flows by a multilayer Saint-Venant model.
      Int. J. for Numerical Methods in Fluids, 56:331-350, DOI:10.1002/fld.1534, 2008.

      BEKKAL BRIKCI, F., CLAIRAMBAULT, J., RIBBA, B., AND PERTHAME, B.
      An age-and-cyclin-structured cell population model for healthy and tumoral tissues.
      Journal of Mathematical Biology, 57(1):91-110, 2008.

      BEKKAL BRIKCI, F., CLAIRAMBAULT, J., AND PERTHAME, B.
      Analysis of a molecular structured population model with possible polynomial growth for the cell division cycle.
      Mathematical and Computer Modelling, 47(7-8):699-713, 2008.

      BRISTEAU, M.-O., AND SAINTE-MARIE, J.
      Derivation of a non-hydrostatic shallow water model; Comparison with Saint-Venant and Boussinesq systems.
      Discrete Contin. Dyn. Syst., Ser. B, 10(4):733-759, 2008.

      CLAIRAMBAULT, J.
      A Step Toward Optimization of Cancer Therapeutics. Physiologically Based Modeling of Circadian Control on Cell Proliferation.
      Article in a special issue of the IEEE-EMB Magazine: "Rhythms from seconds to days, Physiological importance and therapeutic implications". Extended version (5 pages) of a paper first published in the Proceedings of the 28th annual international conference of the IEEE-EMB Society, New-York, August 2006.
      IEEE-EMB Magazine, 27(1):20-24, 2008.

      LÉVI, F., ALTINOK, A., CLAIRAMBAULT, J., AND GOLDBETER, A.
      Implications of circadian clocks for the rhythmic delivery of cancer therapeutics.
      Phil. Trans. Roy. Soc. A, 366(1880):3575-3598, 2008.

      Année 2007

      AUDUSSE, E., AND BRISTEAU, M.-O.
      Finite volume solvers for a multilayer Saint-Venant system.
      Int. J. of Applied Mathematics and Computer Science, 17, 3:311-320, 2007.

      BOUCHUT, F., OUNAISSA, H., PERTHAME, B.
      Upwinding of the source term at interfaces for Euler equations with high friction.
      Computers and Mathematics with Applications, 53(3-4):361-375, 2007.

      CARRILLO, J., CUADRADO, S., AND PERTHAME, B.
      Adaptive dynamics via Hamilton-Jacobi approach and entropy methods for a juvenile-adult model.
      Mathematical Biosciences, 205(1):137-161 (2007).

      CLAIRAMBAULT, J., GAUBERT, S., AND PERTHAME, B.
      An inequality for the Perron and Floquet eigenvalues of monotone differential systems and age structured equations.
      C.-R. Acad. Sci. Ser. I Mathématique, 345:549-554, 2007.

      CLAIRAMBAULT, J.
      Modeling oxaliplatin drug delivery to circadian rhythms in drug metabolism and host tolerance.
      Advanced Drug Delivery Reviews, 59:1054-1068, 2007.

      DOUMIC, M.
      Analysis of a population model structured by the cells molecular content.
      Mathematical Modelling of Natural Phenomena, 2(3):121-152, DOI: 10.1051/mmnp:2007006, 2007.

      DRASDO, D., HÖHME, S., AND BLOCK, M.
      On the role of physics in the growth and pattern formation of multi-cellular systems: What can we learn from individual-cell based models?
      Journal of Statistical Physics, 128(1): 287-345, 2007.

      HÖHME, S., HENGSTLER, J. G., BRULPORT, M., SCHÄFER, M., BAUER, A., GEBHART, R, AND DRASDO, D.
      Mathematical modelling of liver regeneration after intoxication with CCl4.
      Chemico-Biological Interaction, 168(1):74-93, 2007.

      MANGENEY, A., BOUCHUT, F., THOMAS, N., VILOTTE, J. P., AND BRISTEAU, M.-O.
      Numerical modeling of self-channeling granular flows and of their levée/channel deposits.
      Journal of Geophysical Research - Earth Surface, 112, F02017, DOI:10.1029/2006JF000469, 2007.

      PIRULLI, M., BRISTEAU, M.-O., MANGENEY, A., AND SCAVIA, C.
      The effect of the earth pressure coefficients on the runout of granular material.
      Environmental Modelling and Software, 22(10):1437-1454, 2007.

      Année 2006

      BLANCHET, A., DOLBEAULT, J., AND PERTHAME, B.
      Two-dimensional Keller-Segel model: Optimal critical mass and qualitative properties of the solutions.
      Electron. J. Diff. Eqns., 44:1-32, 2006.

      CALVEZ, V., AND PERTHAME, B.
      A Lyapunov function for a two-chemical version of the chemotaxis model.
      BIT Num. Math., 46:85-97, 2006.

      CLAIRAMBAULT, J., MICHEL, P., AND PERTHAME, B.
      Circadian rhytm and tumour growth.
      C.-R. Acad. Sci. Ser. I Mathématique, 342:17-22, 2006.

      CORRIAS, L., AND PERTHAME, B.
      Critical space for the parabolic-parabolic Keller-Segel model in IRd.
      C. R. Acad. Sci. Paris Ser. I Mathématique, 342:745-750, 2006.

      GWIAZDA, P., AND PERTHAME, B.
      Invariants and exponential rate of convergence to steady state in the renewal equation.
      Markov Processes and Related Fields (MPRF), 2:413-424, 2006.

      Année 2005

      ANILE, A. M., MARROCCO, A., ROMANO, V., AND SELLIER, J.-M.
      2d Numerical simulation of the MEP energy-transport model with a mixed finite element scheme.
      Journal of Computational Electronics, 4(3-4):231-259, 2005.

      AUDUSSE, E.
      A multilayer Saint-Venant model.
      Discrete and Continuous Dynamical Systems B, 5(2):189-214, 2005.

      AUDUSSE, E., AND BRISTEAU, M.-O.
      A well-balanced positivity preserving second-order scheme for shallow water flows on unstructured meshes.
      J. Comp. Phys., 206:311-313, 2005.

      AUDUSSE, E., AND PERTHAME, B.
      Uniqueness for a scalar conservation law with discontinuous flux via adapted entropies.
      Proc. Royal Soc. of Edinburgh, 135A:1-13, 2005.

      BASDEVANT, C., CLAIRAMBAULT, J., AND LÉVI, F.
      Optimisation of time scheduled regimen for anti-cancer drug infusion.
      Mathematical Modelling and Numerical Analysis, 39(6):1069-1086, 2005.

      DIEKMANN, O., JABIN, P.-E., MISCHLER, S., AND PERTHAME, B.
      The dynamics of adaptation: an illuminating example and a Hamilton-Jacobi approach.
      Th. Pop. Biol., 67:257-271, 2005.

      FILBET, F., LAURENÇOT, P., AND PERTHAME, B.
      Derivation of hyperbolic models for chemosensitive movement.
      J. Math. Biol., 50:189-207, 2005.

      MARTIN, V., CLÉMENT, F., DECOENE, A., AND GERBEAU, J.-F.
      Parameter identification for a one-dimensional bloo flow model.
      In ESAIM Proceedings, E. Cancès and J.-F. Gerbeau (Eds.), 14:174-200, 2005.

      MICHEL, P., MISCHLER, S., AND PERTHAME, B.
      General relative entropy inequality: an illustration on growth models.
      J. Math. Pures et Appl., 84:1235-1260, 2005.

      RYZHIK, L., AND PERTHAME, B.
      Exponential decay for the fragmentation or cell-division equation.
      J. Diff. Eq., 210:155-177, 2005.

      SOUGANIDIS, P. E., AND PERTHAME, B.
      Front propagation for a jump process arising in spatial ecology.
      Discrete and Continuous Dynamical Systems A, 13(5):1235-1246, 2005.

      Année 2004

      AUDUSSE, E., BOUCHUT, F., BRISTEAU, M.-O., KLEIN, R., AND PERTHAME, B.
      A fast and stable well-balanced scheme with hydrostatic reconstruction for shallow water flows.
      SIAM J. Sc. Comp., 25(6):2050-2065, 2004.

      CHALUB, F., MARKOWICH, P., PERTHAME, B., AND SCHMEISER, C.
      Kinetic models for chemotaxis and their drift-diffusion limits.
      Monatshefte für Mathematik ,142(1-2):123-141, 2004.

      CORRIAS, L., PERTHAME, B., AND ZAAG, H.
      Global solutions of some chemotaxis and angiogenesis systems in high space dimensions.
      Milano J. of Math., 72:1-29, 2004.

      DECOENE, A.
      Equations de Navier-Stokes à surface libre en dimension 3 avec hypothèse hydrostatique.
      Rapport Interne HP-75/04/020/A, EDF R&D, LNHE, Avril 2004.

      KATSAOUNIS, T., PERTHAME, B., AND SIMEONI, C.
      Upwinding sources at interfaces in conservation laws.
      Applied Math. Letters, 17:410-430, 2004.

      MICHEL, P., MISCHLER, S., AND PERTHAME, B.
      General entropy equations for structured population models and scattering.
      C.R. Acad. Sci. Paris, Série I, Mathématique, 338:697-702, 2004.

      PERTHAME, B.
      Mathematical tools for kinetic equations.
      Bull. A.M.S., 41:205-244, 2004.

      PERTHAME, B.
      PDE models for chemotactic movements, parabolic, hyperbolic and kinetic.
      Appl. Math., 49(6):539-564, 2004.

      Année 2003

      AUDUSSE, E., AND BRISTEAU, M.-O.
      Transport of pollutant in shallow water. a two time steps kinetic method.
      Mathematical Modelling and Numerical Analysis, 37(2):389-416, 2003.

      BELHADJ, M., GERBEAU, J.-F., AND PERTHAME, B.
      A multiscale colloid transport model with anistropic degenerate diffusion.
      Asymptotic Analysis, 34(1):41-54, 2003.

      BOUCHUT, F., MANGENEY, A., PERTHAME, B., AND VILOTTE, J.-P.
      Saint-Venant and savage-hutter type for gravity driven shallow waterflows.
      C. R. Acad. Sci. Paris, Ser. I Mathématique, 336(6):531-536 2003.

      CORRIAS, L., PERTHAME, B., AND ZAAG, H.
      A chemotaxis model motivated by angiogenesis.
      C.R. Acad. Sc. Paris, Ser .I Mathématique336(2)141-146, 2003.

      MAKRIDAKIS, C., AND PERTHAME, B.
      Optimal rate of convergence for anisotropic vanishing viscosity limit of a scalar balance law.
      SIAM J. Math. Anal., 34(6):1300-1307, 2003.

      A. Mangeney-Castelnau, J. P. Vilotte, M.-O. Bristeau, B. Perthame, F. Bouchut, C. Simeoni, S. Yernini,
      Numerical modeling of avalanches based on Saint-Venant equations using a kinetic scheme,
      J. Geophys. Res., vol. 108, no B11, pp. 2527-2542, 2003.

      MARROCCO, A.
      Numerical simulation of chemotactic bacteria aggregation via mixed finite elements.
      Mathematical Modelling and Numerical Analysis, 37(4):617-630, 2003.

      Previous publications of the M3N project (2000-2002)

      année 2002          année 2001          année 2000

  • Livres

      PERTHAME, B.
      Transport equations in biology.
      Frontiers in Mathematics, Birkhäuser, Boston, 2007.

  • Conférences et ateliers (à compléter pour 2011, 2012, 2013 et 2014)

      Année 2010

      Özbay H, Benjelloun, H., Bonnet, C., Clairambault, J.
      Stability conditions for a system modeling cell dynamics in leukemia.
      In: Proceedings of the 9th IFAC Workshop on Time Delay Systems, Prague, June 2010.

      Année 2009

      Galle, J., Krinner, A., Buske, P., Drasdo, D., Loeffler, M.
      On the impact of single cell biomechanics on the spatio-temporal organization of regenerative tissue.
      In: World Congress on Medical Physics and Biomedical Engineering, 2009.

      Année 2008

      Doumic, M., Maia, P., Zubelli, J.
      On the calibration of a size-structured population model from experimental data.
      In: ECMTB2008 Proceedings, to appear, 2010.

      ÖZBAY, H., BONNET, C. AND CLAIRAMBAULT, J.
      Stability analysis of systems with distributed delays and application to hematopoietic cell maturation dynamics.
      In: Proceedings of the 47th IEEE Conference on Decision and Control (CDC), Cancun, December 2008, pp. 2050-2055.

      Année 2007

      ROHRSCHNEIDER, M., SCHEUERMANN, G., HOEHME, S. AND DRASDO, D.
      Shape Characterization of Extracted and Simulated Tumor Samples using Topological and Geometric Measures.
      In Proccedings of the 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Lyon, 2007, pp. 6272-6278.

      Année 2006

      CLAIRAMBAULT, J.
      Physiologically based modelling of the circadian control on cell proliferation.
      In Proceedings of the 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, New-York, 2006, pp. 173-176.

      DECOENE, A., AND GERBEAU, J.-F.
      A conservative murd scheme on moving domains. application to three-dimensional free surface flows.
      In Proceedings of Eccomas CFD 2006, P. Wesseling, E. Oñate, and J. Périaux (Eds.), pp. 1-12, 2006.

      Année 2005

      AUDUSSE, E., BRISTEAU, M.-O., AND DECOENE, A.
      3d free surface flows simulations using a multi-layer Saint-Venant model. Comparisons with Navier-Stokes solutions.
      In Proceedings of Enumath 2005, Santiago de Compostela, July 2005. Published in Numerical mathematics and advanced applications ENUMATH 2005, Springer Verlag, 2006.

      CLAIRAMBAULT, J., MICHEL, P., AND PERTHAME, B.
      A mathematical model of the cell cycle and its circadian control.
      Proceedings of the European Conference on Mathematical and Theoretical Biology, Dresden, July 2005. In Mathematical Modeling of Biological Systems, Volume I: Cellular Biophysics, Regulatory Networks, Development, Biomedicine, and Data Analysis, Deutsch, A.; Brusch, L.; Byrne, H.; de Vries, G.; Herzel, H. (Eds.), Birkhäuser, Boston, 2007.

      Année 2004

      AUDUSSE, E.
      A multilayer Saint-Venant model.
      In Proceedings of 4th European Congress on Comput. Meth. in Appl. Sc. and Eng., Vol.I, P. Neittaanmäki, T. Rossi, S. Korotov, E. Oñate, J. Périaux, and D. Knörzer (Eds.), Jyväskylä, July 2004.

      Année 2003

      PAQUIER, A., BRISTEAU, M.-O., PROUST, S., N., R., AND CHAMPAGNE, J.-Y.
      Comparison of 2d flow modelling around a groyne.
      In Proceedings of the XXXth IAHR Congress, pp. 393-400, Thessaloniki, August 2003 .

      AUDUSSE, E., BRISTEAU, M.-O., AND DECOENE, A.
      3d free surface flows simulations using a multi-layer Saint-Venant model. Comparisons with Navier-Stokes solutions.
      In: Proceedings of Enumath 2005, Santiago de Compostela, July 2005. Published in Numerical mathematics and advanced applications ENUMATH 2005, Springer Verlag, 2006.

      CALVEZ, V., PERTHAME, B., AND SHARIFI TABAR, M.
      Modified Keller-Segel system and critical mass for the log interaction kernel.
      In: Stochastic Analysis and Partial Differential Equations, G.-Q. Chen, E. Hsu, and M. Pinsky (Eds.), Publications of the American Mathematical Society, 2006.

      CLAIRAMBAULT, J., MICHEL, P., AND PERTHAME, B.
      A mathematical model of the cell cycle and its circadian control.
      Proceedings of the European Conference on Mathematical and Theoretical Biology, Dresden, July 2005.
      In: Mathematical Modeling of Biological Systems, Volume I: Cellular Biophysics, Regulatory Networks, Development, Biomedicine, and Data Analysis, pp. 239-251, Deutsch, A., Brusch, L., Byrne, H., de Vries, G., Herzel, H. (Eds.), Birkhäuser, Boston, 2007.

      DRASDO, D.
      Center-based Single-cell Models: An Approach to Multi-cellular Organization Based on a Conceptual Analogy to Colloidal Particles.
      In: Single-Cell-Based Models in Biology and Medicine, Anderson, A.R.A., Chaplain M.A.J., Rejniak K.A. (Eds), Birkhäuser, Basel, 2007.

      Drasdo, D., Jagiella, N., Ramis-Conde, I., Vignon-Clémentel, I., Weens, W.
      Modeling steps from a benign tumor to an invasive cancer: examples of intrinsically multi-scale problems.
      In: From single scale-based models to multiscale modeling, Eds. Chauvière, A. and Preziozi, L. and Verdier, C., 2009.

  • Rapports internes et manuscrits de thèses (à compléter)

      Modelling the spatial organization of cell proliferation in the developing central nervous system
      Clairambault, J., Flores, V., Perthame, B., Rapacioli, M., Rofman, E., Verdes, R.(2010) [arXiv:1005.0207v1]

      Analyse et modélisation de phénomènes de croissance et mouvement issus de la biologie,
      T. Lepoutre, Thèse, Université Pierre et Marie Curie, Paris, 6 Novembre 2009.

      Comparison of Perron and Floquet eigenvalues in age structured cell division cycle models
      Clairambault, J., Gaubert , S., Lepoutre, T.(2008) [arXiv:0812.0803v1]

      An inequality for the Perron and Floquet eigenvalues of monotone differential systems and age structured equations
      Clairambault, J., Gaubert , S., Perthame, B.(2007) [arXiv:0704.3820]

      Agrégation de bactéries. Simulations numériques de modèles de réaction-diffusion à l'aide des éléments finis mixtes
      Marrocco A. 57 (2007) [inria-00123344 − version 2]

      A partitioned fluid-structure algorithm for elastic thin valves with contact
      Diniz Dos Santos N. M., Gerbeau J.-F., Bourgat J.-F. 23 (2006) [inria-00111991 − version 2]

      An age-and-cyclin-structured cell population model with proliferation and quiescence for healthy and tumoral tissues
      Bekkal Brikci F., Clairambault J., Ribba B., Perthame B.(2006) [inria-00081301 − version 2]

      Modèle hydrostatique pour les écoulements à surface libre tridimensionnels et schémas numériques,
      A. Decoene, Thèse de doctorat, Université Pierre et Marie Curie, Paris 6, Mai 2006.

      Optimal drug infusion strategies for cancer chronotherapy
      Basdevant C., Clairambault J., Lévi F.(2004) [inria-00070597 − version 1]

      Flux-Upwind Stabilization of the Discontinuous Petrov--Galerkin Formulation with Lagrangian Multipliers for Advection-Diffusion Problems
      Bottasso C. L., Causin P., Sacco R. (2004) [inria-00077044 − version 1]

      Added-mass effect in the design of partitioned algorithms for fluid-structure problems
      Causin P., Gerbeau J.-F., Nobile F. (2004) [inria-00071499 − version 1]

      Numerical simulation of 2D Silicon MESFET and MOSFET described by the MEP based energy-transport model with a mixed finite elements scheme
      Anile A.M., Marrocco A., Romano V., Sellier J.M. (2004) [inria-00071488 − version 1]

      Numerical Simulation of the 2D Non-Parabolic MEP Energy-Transport Model with a Mixed Finite Elements Scheme
      Marrocco A., Romano V., Sellier J.M. (2004) [inria-00071480 − version 1]

      Analysis of a geometrical multiscale blood flow model based on the coupling of ODE's and hyperbolic PDE's
      Fernández M. Á., Milisic V., Quarteroni A. (2004) [inria-00071456 − version 1]

      Homogenization approach to filtration through a fibrous medium
      Belhadj M., Cancès E., Gerbeau J.-F., Mikelic A. (2004) inria-00071254 − version 1]

      A Multilayer Saint-Venant Model
      Audusse E. 35 (2004) [inria-00070749 − version 1]

      Modélisation hyperbolique et analyse numérique pour les écoulements en eaux peu profondes ,
      E. Audusse,Thèse de doctorat, Université Pierre et Marie Curie, Paris 6, septembre 2004.

      A 2d Well-balanced Positivity Preserving Second Order Scheme for Shallow Water Flows on Unstructured Meshes
      Audusse E., Bristeau M.-O. 31 (2004) [inria-00070738 − version 1]

      Uniqueness for a Scalar Conservation Law with Discontinuous Flux via Adapted Entropies
      Audusse E., Perthame B.19 (2004) [inria-00070737 − version 1]

      A Quasi-Newton Algorithm Based on a Reduced Model for Fluid-Structure Interaction Problems in Blood Flows
      Gerbeau J.-F., Vidrascu M. (2003) [inria-00071895 − version 1]

      On a Kinetic Equation for Coalescing Particles
      Escobedo M., Lauren?ot P., Mischler S. (2003) [inria-00071839 − version 1]

      A mathematical model of the cell cycle and its control
      Clairambault J., Laroche B., Mischler S., Perthame B. (2003) [inria-00071690 − version 1]

      Fluid-Structure Interaction in Blood Flows on Geometries coming from Medical Imaging
      Gerbeau J.-F., Vidrascu M., Frey P. (2003) [inria-00071531 − version 1]

  • Rapport d'activité de l'équipe Bang pour 2013
  • Rapport d'activité de l'équipe Mamba pour 2014